How to convert data for Geogrid - Revision history

Adamko: /* Install environment */

2021-02-17T01:59:28Z

Install environment

← Older revision		Revision as of 01:59, 17 February 2021
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	conda create -n wrfx python=3 gdal netcdf4 pyproj paramiko dill h5py psutil proj4 pytz flask pandas		conda create -n wrfx python=3 gdal netcdf4 pyproj paramiko dill h5py psutil proj4 pytz flask pandas
	conda activate wrfx		conda activate wrfx
	conda install -c conda-forge simplekml pygrib f90nml pyhdf xmltodict basemap rasterio		conda install -c conda-forge simplekml pygrib f90nml pyhdf xmltodict basemap rasterio scipy
	pip install MesoPy python-cmr		pip install MesoPy python-cmr
	</pre>		</pre>

2021-02-13T19:31:36Z

Get wrfxpy repository

← Older revision		Revision as of 19:31, 13 February 2021
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	Get repository wrfxpy and checkout to convert_geotiff branch. Shortly, it is going to be available in the master branch.		Get repository wrfxpy and checkout to convert_geotiff branch. Shortly, it is going to be available in the master branch.
	git clone https://github.com/openwfm/wrfxpy		git clone https://github.com/openwfm/wrfxpy
			cd wrfxpy
	git checkout convert_geotiff		git checkout convert_geotiff

2020-08-06T23:08:58Z

← Older revision		Revision as of 23:08, 6 August 2020
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	<pre>		<pre>
	conda create -n ~~wrfxpy~~ python=3 gdal netcdf4 pyproj paramiko dill ~~scikit-learn~~ h5py ~~pandas~~ psutil proj4		conda update -n base -c defaults conda
	conda activate ~~wrfxpy~~		conda create -n wrfx python=3 gdal netcdf4 pyproj paramiko dill h5py psutil proj4 pytz flask pandas
	conda install -c conda-forge simplekml pygrib f90nml pyhdf xmltodict basemap rasterio ~~requests~~		conda activate wrfx
			conda install -c conda-forge simplekml pygrib f90nml pyhdf xmltodict basemap rasterio
	pip install MesoPy python-cmr		pip install MesoPy python-cmr
	</pre>		</pre>

2020-07-19T07:23:45Z

Install environment

← Older revision		Revision as of 07:23, 19 July 2020
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	<pre>		<pre>
	conda create -n wrfxpy python=3 gdal netcdf4 pyproj paramiko dill scikit-learn h5py pandas psutil proj4 ~~rasterio~~		conda create -n wrfxpy python=3 gdal netcdf4 pyproj paramiko dill scikit-learn h5py pandas psutil proj4
	conda activate wrfxpy		conda activate wrfxpy
	conda install -c conda-forge simplekml pygrib f90nml pyhdf xmltodict basemap		conda install -c conda-forge simplekml pygrib f90nml pyhdf xmltodict basemap rasterio requests
	pip install MesoPy python-cmr		pip install MesoPy python-cmr
	</pre>		</pre>

2020-07-19T07:19:10Z

Install environment: rasterio

← Older revision		Revision as of 07:19, 19 July 2020
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	<pre>		<pre>
	conda create -n wrfxpy python=3 gdal netcdf4 pyproj paramiko dill scikit-learn h5py pandas psutil proj4		conda create -n wrfxpy python=3 gdal netcdf4 pyproj paramiko dill scikit-learn h5py pandas psutil proj4 rasterio
	conda activate wrfxpy		conda activate wrfxpy
	conda install -c conda-forge simplekml pygrib f90nml pyhdf xmltodict basemap		conda install -c conda-forge simplekml pygrib f90nml pyhdf xmltodict basemap

2020-07-19T06:19:14Z

Install environment: rm talk

← Older revision		Revision as of 06:19, 19 July 2020
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	== Install environment ==		== Install environment ==

	Create a python environment ~~for gdal compatibility. Shortly this is going to be the environment for wrfxpy installation.~~		Create the python environment:

			<pre>
	conda create -n wrfxpy python=3 gdal netcdf4 pyproj paramiko dill scikit-learn h5py pandas psutil proj4		conda create -n wrfxpy python=3 gdal netcdf4 pyproj paramiko dill scikit-learn h5py pandas psutil proj4
	conda activate wrfxpy		conda activate wrfxpy
	conda install -c conda-forge simplekml pygrib f90nml pyhdf xmltodict basemap		conda install -c conda-forge simplekml pygrib f90nml pyhdf xmltodict basemap
	pip install MesoPy python-cmr		pip install MesoPy python-cmr
			</pre>

	Note that <tt>conda</tt> and <tt>pip</tt> are package managers available in the Anaconda Python distribution.		Note that <tt>conda</tt> and <tt>pip</tt> are package managers available in the Anaconda Python distribution.

2020-07-19T06:16:42Z

Get Anaconda3 distribution: update

← Older revision		Revision as of 06:16, 19 July 2020
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	== Get Anaconda3 distribution ==		== Get Anaconda3 distribution ==

	Download and install the Python 3 [https://www.~~continuum~~.io/~~downloads~~ Anaconda Python] distribution for your platform. We recommend an installation into the user's home directory.		Download and install the Python 3 [https://www.anaconda.com/products/individual Anaconda Python] distribution for your platform. We recommend an installation into the user's home directory.
	~~wget https://repo.continuum.io/archive/Anaconda3-2019.10-Linux-x86_64.sh~~
	~~chmod +x Anaconda3-2019.10-Linux-x86_64.sh~~
	~~./Anaconda3-2019.10-Linux-x86_64.sh~~

	~~Add your environment (~/.custom.csh) the following line~~
	~~setenv PROJ_LIB "$HOME/anaconda3/share/proj"~~
	~~or if you are using bash to ~/.profile or ~/.bashrc~~
	~~export PROJ_LIB="$HOME/anaconda3/share/proj"~~

	== Install environment ==		== Install environment ==

2020-07-09T19:06:08Z

← Older revision		Revision as of 19:06, 9 July 2020
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	* '''GEOGRID.TBL:''' A text file with the information to add to GEOGRID.TBL (depends on src/geo/var_wisdom.py, so only copy what you need).		* '''GEOGRID.TBL:''' A text file with the information to add to GEOGRID.TBL (depends on src/geo/var_wisdom.py, so only copy what you need).
	* '''index.json:''' A JSON file with index information for each variable.		* '''index.json:''' A JSON file with index information for each variable.

			[[Category:WRF-Fire]]
			[[Category:Howtos\|Convert data for Geogrid]]
			[[Category:Data]]

2020-07-09T19:05:51Z

← Older revision		Revision as of 19:05, 9 July 2020
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	* '''GEOGRID.TBL:''' A text file with the information to add to GEOGRID.TBL (depends on src/geo/var_wisdom.py, so only copy what you need).		* '''GEOGRID.TBL:''' A text file with the information to add to GEOGRID.TBL (depends on src/geo/var_wisdom.py, so only copy what you need).
	* '''index.json:''' A JSON file with index information for each variable.		* '''index.json:''' A JSON file with index information for each variable.


	~~----~~



	~~See the github repository for [https://github.com/jbeezley/convert_geotiff.git convert_geotiff] for the latest documentation and source code.~~

	~~[[Category:WRF-Fire]]~~
	~~[[Category:Howtos\|Convert data for Geogrid]]~~
	~~[[Category:Data]]~~

2020-07-02T18:59:09Z

Run convert_geotiff.sh

← Older revision		Revision as of 18:59, 2 July 2020
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	Some examples:		Some examples:
	./convert_geotiff.sh ./elevation.tif geo_data ZSF		./convert_geotiff.sh elevation.tif geo_data ZSF
	./convert_geotiff.sh ./fuel.tif geo_data NFUEL_CAT		./convert_geotiff.sh fuel.tif geo_data NFUEL_CAT
	./convert_geotiff.sh ./fuel.tif ./geo_data NFUEL_CAT -112.8115,-112.1661,39.4820,39.9750		./convert_geotiff.sh fuel.tif geo_data NFUEL_CAT -112.8115,-112.1661,39.4820,39.9750

	== Results from convert_geotiff.sh ==		== Results from convert_geotiff.sh ==